Insertion junction: CLIP2.022384_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022384
Chromosome:chromosome 13
Location:3099660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g584551 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCAGCGGCCCCAATGCGGCGGAACACACGCCTGACGGCAGCGCGCC
Internal bar code:GGCCGTTTCCCAGAGGCAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2054
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAATTTGGGCAGCGTTTGGA
Suggested primer 2:TTGTCTCGGGACTTCTTGCC