Insertion junction: CLIP2.022387_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022387
Chromosome:chromosome 4
Location:2368122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221150 GT90-5,GT90F5 GT90 family protein 5; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTAGCGCCGGGTCCCAGCGAAGCCAGCCTACATCGCGGTTTACGGCAG
Internal bar code:GGGGTCTGAATCTTAATTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1823
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGAGTTACTGGGGAGGTA
Suggested primer 2:CACGCCGTATACGTCATCCA