Insertion junction: CLIP2.022395_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022395
Chromosome:chromosome 3
Location:5021997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179860 (1 of 1) 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase; tRNA-(m5C) methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTACCTGTCTGGTCATCCCTGCCTGTCTGGTCATCCTGCAGGTGGCCG
Internal bar code:CGCCTGACTTTGTAATTCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:973
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTAGTACTCGAACAGGG
Suggested primer 2:ACAGGACACGGCGTTTGTAT