Insertion junction: CLIP2.022398_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022398
Chromosome:chromosome 3
Location:916181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146587 (1 of 3) PTHR24193//PTHR24193:SF87 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTTAAGCCCTCCGGTGGGCACATGCACCAACAGTGCGTTCACAATCG
Internal bar code:CCGCCTTGTCTCAATGGTCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2963
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGGGGTTTCCGCTGCAT
Suggested primer 2:CAGTATGCAACAATCCGGCG