Insertion junction: CLIP2.022400_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022400
Chromosome:chromosome 2
Location:3308437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097650 RPN6 (1 of 1) K03036 - 26S proteasome regulatory subunit N6 (PSMD11, RPN6); 26S proteasome regulatory subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCCCCCTCACCAGGTTCTGCTGCATGAGCGTGTCGTACAGCTCGGC
Internal bar code:GGTGTTTTAATAGTAATACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGGCTCATACACTTGCC
Suggested primer 2:TGAAGCAAGCAAGCAACGAC