Insertion junction: CLIP2.022400_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022400
Chromosome:chromosome 2
Location:3308443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097650 RPN6 (1 of 1) K03036 - 26S proteasome regulatory subunit N6 (PSMD11, RPN6); 26S proteasome regulatory subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGGGATGGGCACGAGGGGTGGGGGAGGGGGGCGTTTTCAACCTTTC
Internal bar code:ATGGTATGACTAAGCCTAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1664
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGCAAGCAAGCAACGAC
Suggested primer 2:AGTGGGCTCATACACTTGCC