Insertion junction: CLIP2.022402_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022402
Chromosome:chromosome 7
Location:4381151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340950 AXL4 (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN; Arabinose chain extension enzyme like protein 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCTGCAGCTGACCAGTGTATCGCACACCACCTACACGCGTATCATC
Internal bar code:CGTGCTAAGTAGTATTCCCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1538
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACCATCGACGGTATGCACT
Suggested primer 2:CAGCATGTGGTTTGACGCAA