Insertion junction: CLIP2.022411_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022411
Chromosome:chromosome 8
Location:368754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358576 (1 of 29) PF13637 - Ankyrin repeats (many copies) (Ank_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACAAACCCGTTGGGCTGCCGCACAAGTACGACTTTACGCCGTTGCAG
Internal bar code:TGCTGGGGTACCGTTTTTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCCCGTAGCTCTTGATC
Suggested primer 2:GCGCCGTAAATGCCGTAAAT