Insertion junction: CLIP2.022414_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022414
Chromosome:chromosome 12
Location:5781974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532750 EEP8 (1 of 1) K10772 - AP endonuclease 2 (APEX2); Endonuclease/exonuclease/phosphatase family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGGCGTTTGACCTCCGGAGCCTGCTGCGCTCCTTTTTACACCCTGC
Internal bar code:GGTGGCAAGTTGTCGTATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1326
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCGCATGAACATGGTTA
Suggested primer 2:GTGCGTAGGAGTTGGTGTCA