Insertion junction: CLIP2.022415_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022415
Chromosome:chromosome 3
Location:5311330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182700 (1 of 1) PTHR31832//PTHR31832:SF3 - FAMILY NOT NAMED // B-BOX ZINC FINGER PROTEIN 20 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGCCAATTCAGGGCTTCCGACAGCCTGACCTTGCTAGATGCAACT
Internal bar code:CATGTGGGTGCCCTTTGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2053
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCGGGACTATGCCTCT
Suggested primer 2:ATTAGTGATCCAGCCTGCGG