Insertion junction: CLIP2.022463_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022463
Chromosome:chromosome 16
Location:922347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648350 PDY2 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCAATGCCAGGCGCAGCGCCGCCAGCAACAGTGGCCTTGGCGGCGGC
Internal bar code:ATATCAATATAACAGACTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:425
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCAAAAATGCAGTGCGA
Suggested primer 2:GTGTGCGTGTGTGTGTGTAC