Insertion junction: CLIP2.022473_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022473
Chromosome:chromosome 2
Location:4525691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCCTGCACCCGCCGCTCCACACGGCGGTGCCCGTCCTGCCGTCAGG
Internal bar code:TAGGGTCAACGCTCTCTTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTTCGCCCAAGGTTTG
Suggested primer 2:GGAACTCGCGCTCGAATTTC