Insertion junction: CLIP2.022473_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022473
Chromosome:chromosome 16
Location:1322413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651700 (1 of 274) IPR020683 - Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGTCTGACTGAGCATGTGGAGTGAGCCACGTGGAAGCGCAGACACGT
Internal bar code:AACGCAATTTGAGATATATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1950
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGACACAAGCCCCCAAG
Suggested primer 2:GGGGCAAACCTCCATAGCTT