Insertion junction: CLIP2.022482_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022482
Chromosome:chromosome 11
Location:4210911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481700 SPL17 Pre-mRNA splicing factor; (1 of 1) PTHR13161:SF15 - SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCACCGCTGCCAGCTGTTGCAGCTGCTGCCCCGGGCAGCTGCGGG
Internal bar code:AGTCTGAAGATTAGGCCGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACAGGT
Suggested primer 2:CGAGCATGGGATGTGCAATG