Insertion junction: CLIP2.022485_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022485
Chromosome:chromosome 7
Location:3745687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338150 RNP1,ChlMEI2g,MEI2,AML1 MEI2 RNA binding protein; (1 of 2) K17579 - protein phosphatase 1 regulatory subunit 42 (PPP1R42, LRRC67) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGACGTGATGGGCGCGCCGTGCAACGCCGCCTGGGCCCGCGCCGCCG
Internal bar code:TTCGTTCGCGTTTGCGTGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3341
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGAACAATGCGACTAAG
Suggested primer 2:AAAAACAATGGGCCGTACGC