Insertion junction: CLIP2.022493_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022493
Chromosome:chromosome 1
Location:4606093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031800 (1 of 1) PTHR23083//PTHR23083:SF433 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGGTAAGCGGTTTTATATGTAACCGCGACATACCATGTCAACCTGA
Internal bar code:GTGGGGTATGCATTTGGTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1986
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGGCGGACTATCTGAAC
Suggested primer 2:ACACACCAACATGAGCCGAT