Insertion junction: CLIP2.022497_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022497
Chromosome:chromosome 4
Location:3875778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230438 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGTGTTGTGTTGTGTGTGTGTGTGTATTTTAACGTCCCTGCCCGCC
Internal bar code:GGGGGAAACAACTATGTTAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGCATGTTGATGGGAGG
Suggested primer 2:AAATTGAGCTGTGGAGGGGG