Insertion junction: CLIP2.022508_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022508
Chromosome:chromosome 2
Location:5627466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACCATGGGGGATGTATCGCGCACACACGTGCAACAACGAGGTCATGC
Internal bar code:TCTCGAACCACCCGTGTTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2316
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCACTGCAGTGCTGGTG
Suggested primer 2:TTCTCCTCCTTCGTGTTGGC