Insertion junction: CLIP2.022523_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022523
Chromosome:chromosome 2
Location:5785047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116950 HDA1 RPD3/HDA1 type histone deacetylase; (1 of 2) 3.5.1.4 - Amidase / Acylase 3'UTR
Cre02.g117000 CYG21 (1 of 70) 4.6.1.2 - Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAACTTCATCTTCCCCGGTGCCCCGTCACCGGCACACACGGCGGACC
Internal bar code:GAATTTTGTAGTATAATCACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4771
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTCCCCTCTCTGCATT
Suggested primer 2:CATTTGGCGATGGTAGCTGC