Insertion junction: CLIP2.022530_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022530
Chromosome:chromosome 2
Location:3763167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100800 (1 of 1) PTHR22847//PTHR22847:SF410 - WD40 REPEAT PROTEIN // WD REPEAT-CONTAINING PROTEIN 27 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCTCCGCCCGCGGCACGCCGCGCAGCGCCAGACGCGACCGCGCCGCC
Internal bar code:ACGGTTTTCCCCGAGAGCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:899
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGAGTCCCTTACAACCC
Suggested primer 2:GTGAGGAGGGTCGGAAACAG