Insertion junction: CLIP2.022534_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022534
Chromosome:chromosome 10
Location:1268157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426750 CYP739A5,CYP29 (1 of 1) 1.14.13.159 - Vitamin D 25-hydroxylase / Vitamin D(3) 25-hydroxylase; Cytochrome P450, CYP120 superfamily CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATTGTGCCTACAGCAATTGGGCCGGAGCAGAGAGCATGCGAAGGTGC
Internal bar code:GAAACCAGACCATCGCGTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:340
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGATGCGGCCTTTAAA
Suggested primer 2:CGGTTGGCATGTCAAAAGGG