Insertion junction: CLIP2.022537_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022537
Chromosome:chromosome 13
Location:1723454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574350 (1 of 4) IPR000719//IPR001245//IPR002290//IPR006189//IPR011009//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // CHASE domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGAGGTGGGCCAGTGCTTGCTGCATAAGGTCATAGATTGTGCCCGTC
Internal bar code:GGTTCTGTCCTTTTACAGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3121
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCACCCAACACTGTACC
Suggested primer 2:TAGAGCCAGGCGAGAAGTCT