Insertion junction: CLIP2.022542_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022542
Chromosome:chromosome 10
Location:5035832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454734 TIC21,PIC1 (1 of 1) PTHR21649//PTHR21649:SF13//PTHR34548 - CHLOROPHYLL A/B BINDING PROTEIN // LHCA2 PROTEIN // FAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGGGGCCATCGGCACACACATACACACACAGCTGTCCTGCTCCTGG
Internal bar code:AGAACACATGTTACCGGATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:255
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGAAGTTCCAGAAGGTG
Suggested primer 2:TCTAAAGCACCAGCCTGAGC