Insertion junction: CLIP2.022545_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022545
Chromosome:chromosome 12
Location:1014775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801359 (1 of 1) IPR000104//IPR001204 - Antifreeze protein, type I // Phosphate transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTAAGAAAATGGTAAAGGGAGGGAGAGGAATGCTGCTCGGCAGTCGGC
Internal bar code:ACGAGGCGAGATAAAGTTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGCAGTACTCGAGACCC
Suggested primer 2:GGTACTTGAAGGCGTGCTCT