Insertion junction: CLIP2.022548_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022548
Chromosome:chromosome 9
Location:5889365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411950 (1 of 3) IPR001005//IPR009057//IPR017877//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb-like domain // Myb domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCCCCTCCTGGGCCTGGAAGCGACTGGGGGCCAGACACGTGCTGCT
Internal bar code:ACATACTGACTGGGACATGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1688
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTCGCACAAGTTGGAGG
Suggested primer 2:CAGTGTCATGACGTCCACCA