Insertion junction: CLIP2.022549_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022549
Chromosome:chromosome 1
Location:8092729
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g064362 (1 of 7) PTHR23257//PTHR23257:SF474 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGCAGCCAACCGCCCATGCCGCGCCTGGCGTCCAGCAGCAGTGTGC
Internal bar code:AACGTAGTTGCGCGACGTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1011
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACCACCACCATCAGAAG
Suggested primer 2:TCCTCTCCCTCGTCCTTCAG