Insertion junction: CLIP2.022553_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022553
Chromosome:chromosome 4
Location:3324387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTAATGACCGTTGGGCTTGAGTGGTTCCATCGCCCACGATGTCTCTG
Internal bar code:TCGTTAAATTAGAGTTCGAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2640
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCCCGAGTATGGTGATG
Suggested primer 2:TCGTGCTCTATGGCGATGAC