Insertion junction: CLIP2.022556_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022556
Chromosome:chromosome 8
Location:2093321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369451 (1 of 39) PTHR13078:SF53 - PROTEIN MAOC-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCCAGGGCCCTGGTGCTTTGCACTTCCGCTCTGGGGCAATCCAGTC
Internal bar code:GAGACGCTCAGAGGTGGTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2402
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTTGAAGCTGGGTTGCC
Suggested primer 2:CTCCCCCTAACTGCCTTTGG