Insertion junction: CLIP2.022561_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022561
Chromosome:chromosome 4
Location:1481553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213904 Mitogen-Activated Protein Kinase 3; (1 of 1) K02208 - cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] (CDK8_11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGACGGTAGACCATCTTGGGGTGGGGTGGTTGGTGGGAAGGGTTGGGT
Internal bar code:CTCACACCTCAGGGATCCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2725
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAAATCATGCTGCTGAGG
Suggested primer 2:CAGTGTATGCGATGCGTGTG