Insertion junction: CLIP2.022564_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022564
Chromosome:chromosome 5
Location:229839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243050 TRX3,TRXf2,TRXF2 (1 of 1) PTHR10438:SF258 - THIOREDOXIN F1, CHLOROPLASTIC-RELATED; Thioredoxin f2, chloroplastic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCAGGATAAGCGACCCTGTCCCACAAGTATCCCAGTACTAGGATAAC
Internal bar code:TTTGAAACGGCTTAAGTGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGTGGAATAGTGCGCA
Suggested primer 2:AGAGTGGTGTGAGCGTGAAG