Insertion junction: CLIP2.022569_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022569
Chromosome:chromosome 6
Location:2379743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268350 HTR9 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCCCGCCGCATCCGTGGCGAGCGCGCTTAAGCGTCCTGCCGTCTGG
Internal bar code:CTTGAACGTTAATTGAGCCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5007
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCGGTCGTTTGTCAGAG
Suggested primer 2:CTTGGTGATGCCCTGGATGT