Insertion junction: CLIP2.022572_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022572
Chromosome:chromosome 2
Location:3641571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041612

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGAGACTGGACCAAAATTACGCTGCCACCGAGAGCTCTCAGGGCATT
Internal bar code:TTAATAACAGACCGGGCTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2008
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGCTCTGGGATTGTGG
Suggested primer 2:CAACATGCACCGCGATACTG