Insertion junction: CLIP2.022572_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022572
Chromosome:chromosome 2
Location:3641572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041612

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCGGATACTGCATACGTGGGGGTTCGGTGGGGCGGAGACGCTGATG
Internal bar code:TTAATAACAGACCGGGCTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4274
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATGCACCGCGATACTG
Suggested primer 2:ATGGTGCTCTGGGATTGTGG