Insertion junction: CLIP2.022585_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022585
Chromosome:chromosome 9
Location:5576303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409650 (1 of 18) PF12906 - RING-variant domain (RINGv) gene_edge/mRNA_edge/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGCACACTTGACAGCGCCTCGACGAGCGCGGCCACAATCGTCGGTTC
Internal bar code:GTGTGCAGAGTTCTATAGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2549
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTAAACGCGCGATCTGAC
Suggested primer 2:CTCTGCCCATGCTTCTTCCA