Insertion junction: CLIP2.022585_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022585
Chromosome:chromosome 9
Location:5576304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409650 (1 of 18) PF12906 - RING-variant domain (RINGv) gene_edge/mRNA_edge/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTCTACCGTTCGTATGTTCCGGAACAGAGAGTGTAGTGCAAGAGTGT
Internal bar code:CGTATTCTATGGGTATTCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1305
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGCCCATGCTTCTTCCA
Suggested primer 2:GTGTAAACGCGCGATCTGAC