Insertion junction: CLIP2.022593_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022593
Chromosome:chromosome 13
Location:3691833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588271 (1 of 1) PF07556 - Protein of unknown function (DUF1538) (DUF1538) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCATTGCTTCATACAAACTATCATAGCTGAACCTCCAGCTGTTGTT
Internal bar code:GGAGGCAACCGTGTGAGTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2461
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGAGGGGAAGCCAGAT
Suggested primer 2:GCGTTTTGCTCTCAACGTGT