Insertion junction: CLIP2.022594_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022594
Chromosome:chromosome 11
Location:215524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467555 (1 of 1) PF00023//PF13857 - Ankyrin repeat (Ank) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGTGTTGGGAGACGCCCATGTCCGCGCGACGCAAATGGTAGTGCGC
Internal bar code:CGTCTTGCCATATCACGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1138
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGGAGGAGGATGGCAT
Suggested primer 2:GCATGGCATCGCTAACCAAG