Insertion junction: CLIP2.022597_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022597
Chromosome:chromosome 6
Location:8168044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00083299

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCCCTTGGACGAGTTTGATGCCGGCGGCCCGGCGCTGCGGTGCCAAC
Internal bar code:TCCCCCTGCCGTGTCTGGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4098
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAGGCAACACATCTTCT
Suggested primer 2:ATTTGCATGAGCTGACCCGA