Insertion junction: CLIP2.022625_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022625
Chromosome:chromosome 3
Location:3366955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166350 (1 of 1) IPR017849//IPR017850 - Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACTGACCCCAACCCACGCCGCCGCCCCTACCTAGCTACCTGCTGCAC
Internal bar code:GGGCATAGAGCAGTCGCTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2192
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTAATTGGGTCGCCACTG
Suggested primer 2:ATTTTGTGACACGTGTGGCG