Insertion junction: CLIP2.022641_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022641
Chromosome:chromosome 1
Location:3549501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023100 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTGGAGCTGCCGCCGCCGCTGATGGCGGTGTCGGCAGCCGGCGGCG
Internal bar code:CATCCTTGCGGAGTTACCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3240
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCCGTGTTCACAAACAG
Suggested primer 2:CTGAGAGCTAGCCATGGAGC