Insertion junction: CLIP2.022649_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022649
Chromosome:chromosome 17
Location:3172968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721000 ABCA5 (1 of 2) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA // SUBFAMILY NOT NAMED; ABC transporter 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGGGGGAGGGCGAGGAAGCTTTGCACACTGGGCTTGGGCACAAATG
Internal bar code:ACCGAGTGTGTGATGGTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1197
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTCTTCTGCGTGCTGCT
Suggested primer 2:TGCATCAAGTTTGCTGCCAC