Insertion junction: CLIP2.022652_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022652
Chromosome:chromosome 16
Location:5195685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684800 (1 of 1) PF00240//PF13855 - Ubiquitin family (ubiquitin) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCGGTATGACGAAAGCGTGGCATGTAAGCACAATGTGTGCGCTGCC
Internal bar code:CTCATGTTATTGAAGTTTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3237
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:AGACTGCAAGAAAGGGACGG
Suggested primer 2:CTGAGCAGCAACCTGATGGA