Insertion junction: CLIP2.022656_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022656
Chromosome:chromosome 16
Location:7319657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00188791

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGGCAACAAACCAAAGTGTCCAAACAGCAGCAAACCCTACCACACAC
Internal bar code:CCGCCGTCTAGAGGGCCCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4332
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:136
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:136

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGCTACTTGCATGTACG
Suggested primer 2:TCGATATGGCGGGATGTGTG