Insertion junction: CLIP2.022656_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022656
Chromosome:chromosome 16
Location:7326528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00188791

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCACAAAAAGCACCGCATGAAGAAAGGTTACGGTACGCACGACTGG
Internal bar code:GGAGACTAGGATAAGCGGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATATGGCGGGATGTGTG
Suggested primer 2:GCACGCTACTTGCATGTACG