Insertion junction: CLIP2.022675_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022675
Chromosome:chromosome 11
Location:2100207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467751 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAGAAGGGTTGGGAAACGCACGGTGGCCTCTTGCCGCATGTCGCACC
Internal bar code:AACTTTGACTGTGATGGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:774
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGCCACTCGTCACTCAC
Suggested primer 2:CGACGACGAGGAGGAAGATG