Insertion junction: CLIP2.022680_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022680
Chromosome:chromosome 1
Location:3484959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACTCGGGGATGGCTTTGCGGCGGCGGGCCTGGTGGGACGCGAGCCGCT
Internal bar code:ATGAAGGAAGCAGCGATGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:6170
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGTCAGGCTCACGCTCC
Suggested primer 2:ACTTGGAGTTGGCGATGAGG