Insertion junction: CLIP2.022680_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022680
Chromosome:chromosome 1
Location:3484963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGAACCAGCCCTGGGTACGGCAGTTGCGCGCCAGCTGTTGCTGCAGG
Internal bar code:GGTGATACGCGGGTTTTAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4201
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGGAGTTGGCGATGAGG
Suggested primer 2:TTATGTCAGGCTCACGCTCC