Insertion junction: CLIP2.022686_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022686
Chromosome:chromosome 11
Location:2531712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095101 (1 of 1) PTHR24012:SF459 - RNA-BINDING PROTEIN 4F CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCGCCCGGATCCGGGCCGGGGTCGGCCCTGGGTGGCGTGGACTCGC
Internal bar code:GCAAAATTGGGGTTGGTGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1521
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTCCATGTCCGCCTTGA
Suggested primer 2:CAACCGAAAACGCTCTTGCA