Insertion junction: CLIP2.022687_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022687
Chromosome:chromosome 3
Location:6086400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800354 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCAGTAGCGCTTTCGCAACCGATGCAAGGGCTGCTGAGCTCCGAGGT
Internal bar code:AAGGCGCGTCACCTGTCACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2788
LEAP-Seq percent confirming:62.3656
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTGGGACTCCGATTCCA
Suggested primer 2:ACATTCCTTCGACCGAACCC