Insertion junction: CLIP2.022695_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022695
Chromosome:chromosome 9
Location:2699077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391753 CDS
Cre09.g801023 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTGAGTTCAGTACGTCATATGCATATGCATAATCCATCCCTCTATTT
Internal bar code:ATAGAATAAGCCGTCACCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2883
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTCTCCCTAGAGCTGT
Suggested primer 2:CCTCTGGTCAGCCCTTTCAG